STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOAOtoancorin. (1125 aa)    
Predicted Functional Partners:
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
    
 0.697
ESPNL
Espin like.
   
 0.606
PPP1R17
Protein phosphatase 1 regulatory subunit 17.
      
 0.576
TECTA
Tectorin alpha.
    
 0.561
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.557
WHRN
Whirlin.
    
 
 0.512
PDZD7
PDZ domain containing 7.
    
 
 0.499
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.495
SMPX
Small muscle protein X-linked.
      
 0.446
cdan1
Codanin-1_C domain-containing protein.
    
 
 0.432
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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