STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRNTaperin (647 aa)    
Predicted Functional Partners:
TSPEAR
Thrombospondin-type laminin G domain and EAR repeats
      
 0.911
GPSM2
G-protein signaling modulator 2
      
 0.811
P2RX2
p2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel
      
 0.801
SMPX
Small muscle protein, X-linked
      
 0.801
PTPRQ
Protein tyrosine phosphatase, receptor type, Q
      
 0.791
HSD17B4
Hydroxysteroid (17-beta) dehydrogenase 4
      
 0.790
PTPRR
Protein tyrosine phosphatase, receptor type, R
      
 0.727
PPP1CB
Protein phosphatase 1, catalytic subunit, beta isozyme
    
   0.711
ABHD12
Abhydrolase domain containing 12
   
  
 0.699
TRIOBP
TRIO and F-actin binding protein
      
 0.648
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Anolis carolinensis, Carolina anole, green anole
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