STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMP4TIMP metallopeptidase inhibitor 4. (223 aa)    
Predicted Functional Partners:
MMP14
Matrix metallopeptidase 14.
    
 0.625
LOC103283025
Inhibitor_I29 domain-containing protein.
     
 0.592
hpx
Uncharacterized protein.
    
 0.578
LOC103282369
PG_binding_1 domain-containing protein.
    
 0.555
H9GGQ9_ANOCA
Uncharacterized protein.
    
 0.555
MMP1
Matrix metallopeptidase 1.
    
 0.499
MMP15
Matrix metallopeptidase 15.
    
 0.481
MMP24
Matrix metallopeptidase 24.
    
 0.475
MMP27
Matrix metallopeptidase 27.
    
 0.474
LOC100553835
ZnMc domain-containing protein.
    
 0.450
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.