Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHD3 | CHD5 | ENSACAP00000004315 | ENSACAP00000002593 | Chromodomain helicase DNA binding protein 3. | Chromodomain helicase DNA binding protein 5. | 0.546 |
CHD3 | GATAD2B | ENSACAP00000004315 | ENSACAP00000008646 | Chromodomain helicase DNA binding protein 3. | GATA zinc finger domain containing 2B. | 0.899 |
CHD3 | HDAC1 | ENSACAP00000004315 | ENSACAP00000004062 | Chromodomain helicase DNA binding protein 3. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.749 |
CHD3 | HDAC2 | ENSACAP00000004315 | ENSACAP00000012046 | Chromodomain helicase DNA binding protein 3. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.749 |
CHD3 | MECP2 | ENSACAP00000004315 | ENSACAP00000012271 | Chromodomain helicase DNA binding protein 3. | Methyl-CpG binding protein 2. | 0.538 |
CHD3 | MTA1 | ENSACAP00000004315 | ENSACAP00000013368 | Chromodomain helicase DNA binding protein 3. | Metastasis associated 1. | 0.831 |
CHD3 | WDR73 | ENSACAP00000004315 | ENSACAP00000015677 | Chromodomain helicase DNA binding protein 3. | WD repeat domain 73. | 0.696 |
CHD3 | chd4 | ENSACAP00000004315 | ENSACAP00000006236 | Chromodomain helicase DNA binding protein 3. | Uncharacterized protein. | 0.547 |
CHD3 | mbd2 | ENSACAP00000004315 | ENSACAP00000008553 | Chromodomain helicase DNA binding protein 3. | Methyl-CpG binding domain protein 2. | 0.854 |
CHD3 | rbbp4 | ENSACAP00000004315 | ENSACAP00000003318 | Chromodomain helicase DNA binding protein 3. | RB binding protein 4, chromatin remodeling factor. | 0.935 |
CHD5 | CHD3 | ENSACAP00000002593 | ENSACAP00000004315 | Chromodomain helicase DNA binding protein 5. | Chromodomain helicase DNA binding protein 3. | 0.546 |
CHD5 | GATAD2B | ENSACAP00000002593 | ENSACAP00000008646 | Chromodomain helicase DNA binding protein 5. | GATA zinc finger domain containing 2B. | 0.899 |
CHD5 | HDAC1 | ENSACAP00000002593 | ENSACAP00000004062 | Chromodomain helicase DNA binding protein 5. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.749 |
CHD5 | HDAC2 | ENSACAP00000002593 | ENSACAP00000012046 | Chromodomain helicase DNA binding protein 5. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.749 |
CHD5 | MECP2 | ENSACAP00000002593 | ENSACAP00000012271 | Chromodomain helicase DNA binding protein 5. | Methyl-CpG binding protein 2. | 0.538 |
CHD5 | MTA1 | ENSACAP00000002593 | ENSACAP00000013368 | Chromodomain helicase DNA binding protein 5. | Metastasis associated 1. | 0.831 |
CHD5 | WDR73 | ENSACAP00000002593 | ENSACAP00000015677 | Chromodomain helicase DNA binding protein 5. | WD repeat domain 73. | 0.696 |
CHD5 | chd4 | ENSACAP00000002593 | ENSACAP00000006236 | Chromodomain helicase DNA binding protein 5. | Uncharacterized protein. | 0.546 |
CHD5 | mbd2 | ENSACAP00000002593 | ENSACAP00000008553 | Chromodomain helicase DNA binding protein 5. | Methyl-CpG binding domain protein 2. | 0.854 |
CHD5 | rbbp4 | ENSACAP00000002593 | ENSACAP00000003318 | Chromodomain helicase DNA binding protein 5. | RB binding protein 4, chromatin remodeling factor. | 0.935 |
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