H9GK89_ANOCA protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H9GK89_ANOCA

Uncharacterized protein. (545 aa)

Predicted Functional Partners:

G1KWH5_ANOCA

0.884

LOC100564083

0.874

H9GSE5_ANOCA

0.870

GRB2

0.841

IL1RAP

0.610

H9GDV7_ANOCA

0.579

LRFN5

0.509

PTK7

0.493

NTRK2

0.489

LOC100557787

0.489

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G1KWH5_ANOCA	GRB2	ENSACAP00000019331	ENSACAP00000006419	Uncharacterized protein.	Growth factor receptor bound protein 2.	0.668
G1KWH5_ANOCA	H9GDV7_ANOCA	ENSACAP00000019331	ENSACAP00000008262	Uncharacterized protein.	Uncharacterized protein.	0.579
G1KWH5_ANOCA	H9GK89_ANOCA	ENSACAP00000019331	ENSACAP00000013504	Uncharacterized protein.	Uncharacterized protein.	0.884
G1KWH5_ANOCA	IL1RAP	ENSACAP00000019331	ENSACAP00000000788	Uncharacterized protein.	Interleukin 1 receptor accessory protein.	0.610
G1KWH5_ANOCA	LOC100557787	ENSACAP00000019331	ENSACAP00000008528	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.486
G1KWH5_ANOCA	LRFN5	ENSACAP00000019331	ENSACAP00000009792	Uncharacterized protein.	Leucine rich repeat and fibronectin type III domain containing 5.	0.509
G1KWH5_ANOCA	NTRK2	ENSACAP00000019331	ENSACAP00000001066	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.486
G1KWH5_ANOCA	PTK7	ENSACAP00000019331	ENSACAP00000004825	Uncharacterized protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.493
GRB2	G1KWH5_ANOCA	ENSACAP00000006419	ENSACAP00000019331	Growth factor receptor bound protein 2.	Uncharacterized protein.	0.668
GRB2	H9GK89_ANOCA	ENSACAP00000006419	ENSACAP00000013504	Growth factor receptor bound protein 2.	Uncharacterized protein.	0.841
GRB2	LOC100557787	ENSACAP00000006419	ENSACAP00000008528	Growth factor receptor bound protein 2.	Tyrosine-protein kinase receptor.	0.559
GRB2	LOC100564083	ENSACAP00000006419	ENSACAP00000009984	Growth factor receptor bound protein 2.	Uncharacterized protein.	0.441
GRB2	NTRK2	ENSACAP00000006419	ENSACAP00000001066	Growth factor receptor bound protein 2.	Tyrosine-protein kinase receptor.	0.890
GRB2	PTK7	ENSACAP00000006419	ENSACAP00000004825	Growth factor receptor bound protein 2.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.534
H9GDV7_ANOCA	G1KWH5_ANOCA	ENSACAP00000008262	ENSACAP00000019331	Uncharacterized protein.	Uncharacterized protein.	0.579
H9GDV7_ANOCA	H9GK89_ANOCA	ENSACAP00000008262	ENSACAP00000013504	Uncharacterized protein.	Uncharacterized protein.	0.579
H9GK89_ANOCA	G1KWH5_ANOCA	ENSACAP00000013504	ENSACAP00000019331	Uncharacterized protein.	Uncharacterized protein.	0.884
H9GK89_ANOCA	GRB2	ENSACAP00000013504	ENSACAP00000006419	Uncharacterized protein.	Growth factor receptor bound protein 2.	0.841
H9GK89_ANOCA	H9GDV7_ANOCA	ENSACAP00000013504	ENSACAP00000008262	Uncharacterized protein.	Uncharacterized protein.	0.579
H9GK89_ANOCA	H9GSE5_ANOCA	ENSACAP00000013504	ENSACAP00000019405	Uncharacterized protein.	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.	0.870