Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ISL1 | LDB1 | ENSACAP00000022970 | ENSACAP00000012144 | ISL LIM homeobox 1. | LIM domain binding 1. | 0.815 |
ISL1 | LDB2 | ENSACAP00000022970 | ENSACAP00000008234 | ISL LIM homeobox 1. | LIM domain binding 2. | 0.815 |
ISL1 | LHX3 | ENSACAP00000022970 | ENSACAP00000015386 | ISL LIM homeobox 1. | LIM homeobox 3. | 0.890 |
ISL1 | LHX4 | ENSACAP00000022970 | ENSACAP00000000836 | ISL LIM homeobox 1. | LIM homeobox 4. | 0.879 |
ISL1 | SSBP3 | ENSACAP00000022970 | ENSACAP00000014058 | ISL LIM homeobox 1. | Single stranded DNA binding protein 3. | 0.404 |
LDB1 | ISL1 | ENSACAP00000012144 | ENSACAP00000022970 | LIM domain binding 1. | ISL LIM homeobox 1. | 0.815 |
LDB1 | LHX2 | ENSACAP00000012144 | ENSACAP00000014652 | LIM domain binding 1. | LIM homeobox 2. | 0.711 |
LDB1 | LHX3 | ENSACAP00000012144 | ENSACAP00000015386 | LIM domain binding 1. | LIM homeobox 3. | 0.611 |
LDB1 | LHX4 | ENSACAP00000012144 | ENSACAP00000000836 | LIM domain binding 1. | LIM homeobox 4. | 0.611 |
LDB1 | LHX9 | ENSACAP00000012144 | ENSACAP00000014320 | LIM domain binding 1. | LIM homeobox 9. | 0.720 |
LDB1 | SSBP3 | ENSACAP00000012144 | ENSACAP00000014058 | LIM domain binding 1. | Single stranded DNA binding protein 3. | 0.742 |
LDB2 | ISL1 | ENSACAP00000008234 | ENSACAP00000022970 | LIM domain binding 2. | ISL LIM homeobox 1. | 0.815 |
LDB2 | LHX2 | ENSACAP00000008234 | ENSACAP00000014652 | LIM domain binding 2. | LIM homeobox 2. | 0.711 |
LDB2 | LHX3 | ENSACAP00000008234 | ENSACAP00000015386 | LIM domain binding 2. | LIM homeobox 3. | 0.611 |
LDB2 | LHX4 | ENSACAP00000008234 | ENSACAP00000000836 | LIM domain binding 2. | LIM homeobox 4. | 0.611 |
LDB2 | LHX9 | ENSACAP00000008234 | ENSACAP00000014320 | LIM domain binding 2. | LIM homeobox 9. | 0.720 |
LDB2 | SSBP3 | ENSACAP00000008234 | ENSACAP00000014058 | LIM domain binding 2. | Single stranded DNA binding protein 3. | 0.742 |
LHX2 | LDB1 | ENSACAP00000014652 | ENSACAP00000012144 | LIM homeobox 2. | LIM domain binding 1. | 0.711 |
LHX2 | LDB2 | ENSACAP00000014652 | ENSACAP00000008234 | LIM homeobox 2. | LIM domain binding 2. | 0.711 |
LHX2 | SSBP3 | ENSACAP00000014652 | ENSACAP00000014058 | LIM homeobox 2. | Single stranded DNA binding protein 3. | 0.404 |
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