STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYF5Myogenic factor. (250 aa)    
Predicted Functional Partners:
PAX3
Paired box 3.
   
 
 0.716
TCF4
Transcription factor 4.
    
 0.683
TCF12
Transcription factor 12.
    
 0.683
LOC103282379
Transcription factor 3.
    
 0.683
LOC100563897
BHLH domain-containing protein.
    
 0.683
MYF6
Myogenic factor.
  
 
0.658
MYOG
Myogenin.
  
 
0.628
EP300
E1A binding protein p300.
    
 
 0.607
MEF2C
Myocyte enhancer factor 2C.
    
 0.571
MEF2A
Myocyte enhancer factor 2A.
    
 0.571
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.