STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB3LIM domain binding 3. (525 aa)    
Predicted Functional Partners:
PDLIM1
PDZ and LIM domain 1.
 
 
  0.744
PDLIM3
PDZ and LIM domain 3.
 
 
 0.621
MYO3A
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.573
PDLIM7
PDZ and LIM domain 7.
   
 
0.562
PDLIM5
PDZ and LIM domain 5.
   
 
0.562
EHBP1
EH domain binding protein 1.
    
 0.561
MYOT
Myotilin.
   
  
 0.556
SMTNL1
Smoothelin like 1.
   
 
  0.555
PDLIM4
PDZ and LIM domain 4.
 
  
  0.553
IFT57
Intraflagellar transport 57.
    
 0.543
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.