STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1KQ52_ANOCAUncharacterized protein. (53 aa)    
Predicted Functional Partners:
CMTM8
CKLF like MARVEL transmembrane domain containing 8.
      
 0.637
Cmtm5
Uncharacterized protein.
      
 0.622
CKLF
Chemokine like factor.
      
 0.620
CD151
Tetraspanin.
      
 0.577
THRAP3
Thyroid hormone receptor associated protein 3.
      
 0.545
INVS
Inversin.
      
 0.538
H9GEK1_ANOCA
Ig-like domain-containing protein.
  
     0.470
CMTM4
CKLF like MARVEL transmembrane domain containing 4.
    
 
0.466
H9GR67_ANOCA
Ig-like domain-containing protein.
  
 
  0.455
LOC100552287
Tetraspanin.
      
 0.444
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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