Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LIG4 | POLR2A | ENSACAP00000014275 | ENSACAP00000014487 | DNA ligase. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.576 |
LIG4 | TNFSF12 | ENSACAP00000014275 | ENSACAP00000014536 | DNA ligase. | TNF superfamily member 12; Belongs to the tumor necrosis factor family. | 0.583 |
MAP3K14 | TNFRSF11A | ENSACAP00000016195 | ENSACAP00000021073 | Mitogen-activated protein kinase kinase kinase 14. | TNF receptor superfamily member 11a. | 0.644 |
MAP3K14 | TNFSF11 | ENSACAP00000016195 | ENSACAP00000001868 | Mitogen-activated protein kinase kinase kinase 14. | TNF superfamily member 11; Belongs to the tumor necrosis factor family. | 0.580 |
MAP3K14 | TNFSF12 | ENSACAP00000016195 | ENSACAP00000014536 | Mitogen-activated protein kinase kinase kinase 14. | TNF superfamily member 12; Belongs to the tumor necrosis factor family. | 0.580 |
MAP3K14 | TNFSF13B | ENSACAP00000016195 | ENSACAP00000014267 | Mitogen-activated protein kinase kinase kinase 14. | TNF superfamily member 13b; Belongs to the tumor necrosis factor family. | 0.652 |
MAP3K14 | TRAF3 | ENSACAP00000016195 | ENSACAP00000000193 | Mitogen-activated protein kinase kinase kinase 14. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.943 |
MAP3K14 | TRAF5 | ENSACAP00000016195 | ENSACAP00000016112 | Mitogen-activated protein kinase kinase kinase 14. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.779 |
MAP3K14 | tnfrsf12a | ENSACAP00000016195 | ENSACAP00000022232 | Mitogen-activated protein kinase kinase kinase 14. | Uncharacterized protein. | 0.433 |
POLR2A | LIG4 | ENSACAP00000014487 | ENSACAP00000014275 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA ligase. | 0.576 |
POLR2A | TNFSF12 | ENSACAP00000014487 | ENSACAP00000014536 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TNF superfamily member 12; Belongs to the tumor necrosis factor family. | 0.684 |
R4GDK3_ANOCA | TNFSF12 | ENSACAP00000023467 | ENSACAP00000014536 | TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. | TNF superfamily member 12; Belongs to the tumor necrosis factor family. | 0.661 |
TNFRSF11A | MAP3K14 | ENSACAP00000021073 | ENSACAP00000016195 | TNF receptor superfamily member 11a. | Mitogen-activated protein kinase kinase kinase 14. | 0.644 |
TNFRSF11A | TNFSF11 | ENSACAP00000021073 | ENSACAP00000001868 | TNF receptor superfamily member 11a. | TNF superfamily member 11; Belongs to the tumor necrosis factor family. | 0.998 |
TNFRSF11A | TNFSF12 | ENSACAP00000021073 | ENSACAP00000014536 | TNF receptor superfamily member 11a. | TNF superfamily member 12; Belongs to the tumor necrosis factor family. | 0.561 |
TNFRSF11A | TNFSF13B | ENSACAP00000021073 | ENSACAP00000014267 | TNF receptor superfamily member 11a. | TNF superfamily member 13b; Belongs to the tumor necrosis factor family. | 0.614 |
TNFRSF11A | TRAF3 | ENSACAP00000021073 | ENSACAP00000000193 | TNF receptor superfamily member 11a. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.669 |
TNFRSF11A | TRAF5 | ENSACAP00000021073 | ENSACAP00000016112 | TNF receptor superfamily member 11a. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.734 |
TNFRSF11A | tnfrsf12a | ENSACAP00000021073 | ENSACAP00000022232 | TNF receptor superfamily member 11a. | Uncharacterized protein. | 0.500 |
TNFSF11 | MAP3K14 | ENSACAP00000001868 | ENSACAP00000016195 | TNF superfamily member 11; Belongs to the tumor necrosis factor family. | Mitogen-activated protein kinase kinase kinase 14. | 0.580 |
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