PRPF4 protein (Anolis carolinensis) - STRING interaction network

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Predicted Interactions

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textmining

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[Homology]

Score

PRPF4

Pre-mRNA processing factor 4. (521 aa)

Predicted Functional Partners:

PRPF3

0.999

PRPF6

0.999

PRPF31

0.999

PRPF8

0.998

SART1

0.998

SNRNP200

0.997

EFTUD2

0.997

LSM3

0.997

LSM6

0.996

LSM2

0.996

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFTUD2	LSM2	ENSACAP00000007670	ENSACAP00000017009	Elongation factor Tu GTP binding domain containing 2.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.976
EFTUD2	LSM3	ENSACAP00000007670	ENSACAP00000013263	Elongation factor Tu GTP binding domain containing 2.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
EFTUD2	LSM6	ENSACAP00000007670	ENSACAP00000003889	Elongation factor Tu GTP binding domain containing 2.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.962
EFTUD2	PRPF3	ENSACAP00000007670	ENSACAP00000003159	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 3.	0.998
EFTUD2	PRPF31	ENSACAP00000007670	ENSACAP00000015798	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 31.	0.999
EFTUD2	PRPF4	ENSACAP00000007670	ENSACAP00000014914	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 4.	0.997
EFTUD2	PRPF6	ENSACAP00000007670	ENSACAP00000006435	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 6.	0.999
EFTUD2	PRPF8	ENSACAP00000007670	ENSACAP00000014503	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 8.	0.999
EFTUD2	SART1	ENSACAP00000007670	ENSACAP00000017999	Elongation factor Tu GTP binding domain containing 2.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.998
EFTUD2	SNRNP200	ENSACAP00000007670	ENSACAP00000000445	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein U5 subunit 200.	0.999
LSM2	EFTUD2	ENSACAP00000017009	ENSACAP00000007670	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Elongation factor Tu GTP binding domain containing 2.	0.976
LSM2	LSM3	ENSACAP00000017009	ENSACAP00000013263	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM2	LSM6	ENSACAP00000017009	ENSACAP00000003889	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
LSM2	PRPF3	ENSACAP00000017009	ENSACAP00000003159	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 3.	0.997
LSM2	PRPF31	ENSACAP00000017009	ENSACAP00000015798	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 31.	0.990
LSM2	PRPF4	ENSACAP00000017009	ENSACAP00000014914	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 4.	0.996
LSM2	PRPF6	ENSACAP00000017009	ENSACAP00000006435	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 6.	0.982
LSM2	PRPF8	ENSACAP00000017009	ENSACAP00000014503	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 8.	0.978
LSM2	SART1	ENSACAP00000017009	ENSACAP00000017999	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.997
LSM2	SNRNP200	ENSACAP00000017009	ENSACAP00000000445	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein U5 subunit 200.	0.992