STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAP6Transmembrane protein 8A. (571 aa)    
Predicted Functional Partners:
NPRL3
NPR3 like, GATOR1 complex subunit.
      
 0.748
LUC7L
LUC7 like.
      
 0.697
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.679
HMGXB4
HMG-box containing 4.
      
 0.547
SAMD5
Sterile alpha motif domain containing 5.
      
 0.482
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
      
 0.479
FOXRED2
FAD dependent oxidoreductase domain containing 2.
      
 0.455
METTL23
Methyltransferase like 23.
      
 0.449
med29
Uncharacterized protein.
      
 0.447
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
      
 0.426
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.