FIS1 protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FIS1

Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (151 aa)

Predicted Functional Partners:

TBC1D15

0.958

TBC1D17

0.930

DNM1L

0.806

PEX3

0.766

GDAP1

0.753

ATAD1

0.741

PEX13

0.727

PEX16

0.724

PEX11A

0.719

PEX11B

0.719

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATAD1	DNM1L	ENSACAP00000014883	ENSACAP00000012237	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.573
ATAD1	FIS1	ENSACAP00000014883	ENSACAP00000017312	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.741
ATAD1	GDAP1	ENSACAP00000014883	ENSACAP00000012877	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.	0.605
ATAD1	PEX11A	ENSACAP00000014883	ENSACAP00000011733	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	Peroxisomal biogenesis factor 11 alpha.	0.611
ATAD1	PEX11B	ENSACAP00000014883	ENSACAP00000014110	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	Peroxisomal biogenesis factor 11 beta.	0.611
ATAD1	PEX13	ENSACAP00000014883	ENSACAP00000002832	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	Peroxisomal biogenesis factor 13.	0.688
ATAD1	PEX16	ENSACAP00000014883	ENSACAP00000014599	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	Peroxisomal membrane protein PEX16.	0.642
ATAD1	PEX3	ENSACAP00000014883	ENSACAP00000007972	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	Peroxisomal biogenesis factor 3.	0.674
DNM1L	ATAD1	ENSACAP00000012237	ENSACAP00000014883	Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	0.573
DNM1L	FIS1	ENSACAP00000012237	ENSACAP00000017312	Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.806
DNM1L	TBC1D15	ENSACAP00000012237	ENSACAP00000007355	Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	TBC1 domain family member 15.	0.498
FIS1	ATAD1	ENSACAP00000017312	ENSACAP00000014883	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	0.741
FIS1	DNM1L	ENSACAP00000017312	ENSACAP00000012237	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.806
FIS1	GDAP1	ENSACAP00000017312	ENSACAP00000012877	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.	0.753
FIS1	PEX11A	ENSACAP00000017312	ENSACAP00000011733	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	Peroxisomal biogenesis factor 11 alpha.	0.719
FIS1	PEX11B	ENSACAP00000017312	ENSACAP00000014110	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	Peroxisomal biogenesis factor 11 beta.	0.719
FIS1	PEX13	ENSACAP00000017312	ENSACAP00000002832	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	Peroxisomal biogenesis factor 13.	0.727
FIS1	PEX16	ENSACAP00000017312	ENSACAP00000014599	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	Peroxisomal membrane protein PEX16.	0.724
FIS1	PEX3	ENSACAP00000017312	ENSACAP00000007972	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	Peroxisomal biogenesis factor 3.	0.766
FIS1	TBC1D15	ENSACAP00000017312	ENSACAP00000007355	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	TBC1 domain family member 15.	0.958