STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phf19PHD-type domain-containing protein. (451 aa)    
Predicted Functional Partners:
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.893
JARID2
Jumonji and AT-rich interaction domain containing 2.
    
 0.889
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.880
rbbp4
RB binding protein 4, chromatin remodeling factor.
   
 0.830
EED
Embryonic ectoderm development.
   
 0.829
INTS1
Integrator complex subunit 1.
    
 0.775
LOC103282856
Uncharacterized protein.
    
 0.766
KDM6B
Lysine demethylase 6B.
    
 0.756
kdm6a
Uncharacterized protein.
    
 0.756
AEBP2
AE binding protein 2.
    
 0.747
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.