STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC10Histone deacetylase 10. (663 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.827
ARID4A
AT-rich interaction domain 4A.
    
 0.827
TUBGCP6
Tubulin gamma complex associated protein 6.
 
 
   0.663
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.650
SIN3A
SIN3 transcription regulator family member A.
   
 0.625
rbbp4
RB binding protein 4, chromatin remodeling factor.
   
 0.605
WDR73
WD repeat domain 73.
   
 0.605
RANBP2
RAN binding protein 2.
   
 0.574
SIN3B
SIN3 transcription regulator family member B.
   
 0.567
LOC103281850
Uncharacterized protein.
   
 0.567
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.