Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETS1 | LMX1B | ENSACAP00000016092 | ENSACAP00000001809 | ETS proto-oncogene 1, transcription factor. | LIM homeobox transcription factor 1 beta. | 0.692 |
ETS1 | RFX4 | ENSACAP00000016092 | ENSACAP00000015115 | ETS proto-oncogene 1, transcription factor. | Regulatory factor X4. | 0.688 |
ETS1 | SOX1 | ENSACAP00000016092 | ENSACAP00000021099 | ETS proto-oncogene 1, transcription factor. | SRY-box transcription factor 1. | 0.688 |
ETS1 | TBX20 | ENSACAP00000016092 | ENSACAP00000007326 | ETS proto-oncogene 1, transcription factor. | T-box transcription factor 20. | 0.688 |
ETS1 | pou3f3 | ENSACAP00000016092 | ENSACAP00000020802 | ETS proto-oncogene 1, transcription factor. | POU domain protein. | 0.689 |
IRX1 | pou3f3 | ENSACAP00000019395 | ENSACAP00000020802 | Iroquois homeobox 1. | POU domain protein. | 0.455 |
LMX1B | ETS1 | ENSACAP00000001809 | ENSACAP00000016092 | LIM homeobox transcription factor 1 beta. | ETS proto-oncogene 1, transcription factor. | 0.692 |
LMX1B | PTCH1 | ENSACAP00000001809 | ENSACAP00000012890 | LIM homeobox transcription factor 1 beta. | Patched 1. | 0.688 |
LMX1B | RFX4 | ENSACAP00000001809 | ENSACAP00000015115 | LIM homeobox transcription factor 1 beta. | Regulatory factor X4. | 0.688 |
LMX1B | SOX1 | ENSACAP00000001809 | ENSACAP00000021099 | LIM homeobox transcription factor 1 beta. | SRY-box transcription factor 1. | 0.688 |
LMX1B | TBX20 | ENSACAP00000001809 | ENSACAP00000007326 | LIM homeobox transcription factor 1 beta. | T-box transcription factor 20. | 0.722 |
LMX1B | WT1 | ENSACAP00000001809 | ENSACAP00000002453 | LIM homeobox transcription factor 1 beta. | WT1 transcription factor. | 0.695 |
LMX1B | pou3f3 | ENSACAP00000001809 | ENSACAP00000020802 | LIM homeobox transcription factor 1 beta. | POU domain protein. | 0.691 |
LOC103282884 | pou3f3 | ENSACAP00000011379 | ENSACAP00000020802 | Uncharacterized protein. | POU domain protein. | 0.434 |
PCF11 | pou3f3 | ENSACAP00000001271 | ENSACAP00000020802 | PCF11 cleavage and polyadenylation factor subunit. | POU domain protein. | 0.440 |
PTCH1 | LMX1B | ENSACAP00000012890 | ENSACAP00000001809 | Patched 1. | LIM homeobox transcription factor 1 beta. | 0.688 |
PTCH1 | RFX4 | ENSACAP00000012890 | ENSACAP00000015115 | Patched 1. | Regulatory factor X4. | 0.688 |
PTCH1 | SOX1 | ENSACAP00000012890 | ENSACAP00000021099 | Patched 1. | SRY-box transcription factor 1. | 0.688 |
PTCH1 | TBX20 | ENSACAP00000012890 | ENSACAP00000007326 | Patched 1. | T-box transcription factor 20. | 0.688 |
PTCH1 | WT1 | ENSACAP00000012890 | ENSACAP00000002453 | Patched 1. | WT1 transcription factor. | 0.586 |
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