STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7T769_CAPTEUncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (605 aa)    
Predicted Functional Partners:
R7VKD8_CAPTE
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
   
 0.997
R7V2G8_CAPTE
Pep3_Vps18 domain-containing protein.
   
 0.994
R7U9L5_CAPTE
CNH domain-containing protein.
   
 0.993
R7T5T9_CAPTE
Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.
   
 0.992
R7VE46_CAPTE
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 0.990
R7UXU6_CAPTE
CNH domain-containing protein.
   
 0.988
R7UA94_CAPTE
WD_REPEATS_REGION domain-containing protein.
    
 
 0.963
N1PB12_CAPTE
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.960
R7TLK6_CAPTE
Uncharacterized protein.
    
 
 0.960
R7V1F2_CAPTE
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.957
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.