STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RphRabphilin. (672 aa)    
Predicted Functional Partners:
R7TD52_CAPTE
Uncharacterized protein.
   
 
 0.888
R7VM57_CAPTE
Uncharacterized protein.
    
 
 0.808
R7VF32_CAPTE
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.732
Syt15
Synaptotagmin 15.
   
  
0.526
R7TCP3_CAPTE
Uncharacterized protein.
    
 
 0.514
R7U430_CAPTE
Uncharacterized protein.
    
 
 0.514
R7UFL0_CAPTE
Uncharacterized protein.
    
 
 0.514
R7UIN0_CAPTE
CABIT domain-containing protein.
    
 
 0.514
R7TIX8_CAPTE
Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.513
R7TVD9_CAPTE
Uncharacterized protein.
      
 0.481
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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