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dnaN protein (Idiomarina loihiensis) - STRING interaction network
"dnaN" - DNA polymerase sliding clamp subunit in Idiomarina loihiensis
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
dnaNDNA polymerase sliding clamp subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (367 aa)    
Predicted Functional Partners:
polA
DNA polymerase I (921 aa)
   
  0.999
dnaX
DNA polymerase III, gamma/tau subunits (681 aa)
 
  0.998
IL1689
DNA polymerase III alpha subunit (1158 aa)
   
  0.998
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (805 aa)
  0.997
holB
DNA polymerase III subunit delta’ (286 aa)
 
  0.997
dnaA
DNA replication initiation ATPase; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (454 aa)
 
 
  0.995
holA
DNA polymerase III subunit delta (360 aa)
   
  0.993
dnaQ
DNA polymerase III subunit epsilon (235 aa)
 
 
  0.992
IL1420
DNA polymerase III subunit epsilon (248 aa)
     
  0.986
IL1176
3’-5’ exonuclease (215 aa)
     
  0.986
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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