STRINGSTRING
fadB protein (Idiomarina loihiensis) - STRING interaction network
"fadB" - Fatty acid oxidation complex alpha subunit in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadBFatty acid oxidation complex alpha subunit; Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate (718 aa)    
Predicted Functional Partners:
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed (387 aa)
  0.999
fadI
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed (436 aa)
  0.999
IL0872
Acetyl-CoA acetyltransferase (393 aa)
  0.999
IL1665
acyl-CoA dehydrogenase (817 aa)
 
  0.999
IL0917
acyl-CoA dehydrogenase (779 aa)
 
  0.999
IL1963
acyl-CoA dehydrogenase (594 aa)
 
  0.999
IL0178
glutaryl-CoA dehydrogenase (390 aa)
 
  0.998
aidB
Acyl-CoA dehydrogenase (559 aa)
   
  0.997
IL0874
acyl-CoA dehydrogenase (389 aa)
   
  0.997
caiA
acyl-CoA dehydrogenase (385 aa)
   
  0.997
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (5%) [HD]