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def protein (Idiomarina loihiensis) - STRING interaction network
"def" - N-formylmethionyl-tRNA deformylase in Idiomarina loihiensis
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defN-formylmethionyl-tRNA deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (174 aa)    
Predicted Functional Partners:
fmt
Methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (316 aa)
 
  0.998
trkA
K+ transport system, NAD-binding component (458 aa)
   
        0.910
sun
tRNA and rRNA cytosine-C5-methylase (442 aa)
   
      0.907
comM
ATPase (515 aa)
          0.885
rplQ
Ribosomal protein L17 (133 aa)
     
 
  0.830
smf
DNA uptake Rossmann fold nucleotide-binding protein (336 aa)
         
  0.778
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (262 aa)
   
   
  0.768
smg
Hypothetical protein (157 aa)
   
        0.764
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (206 aa)
 
   
  0.763
IL0021
CDGSH-type zinc finger protein (170 aa)
   
        0.760
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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