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hipB protein (Idiomarina loihiensis) - STRING interaction network
"hipB" - HipB transcriptional regulator in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hipBHipB transcriptional regulator (90 aa)    
Predicted Functional Partners:
hipA
HipA (437 aa)
 
          0.979
rmf
Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes) (58 aa)
   
          0.625
rseC
Positive regulator of sigma E activity (147 aa)
   
          0.579
IL0443
Hypothetical protein (152 aa)
   
          0.522
IL2083
Hypothetical protein (441 aa)
 
          0.503
IL0852
Hypothetical protein (103 aa)
   
          0.441
IL2416
Hypothetical protein (98 aa)
   
          0.430
pulM
Type II secretory pathway, component PulM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (172 aa)
   
          0.420
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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