STRINGSTRING
hipA protein (Idiomarina loihiensis) - STRING interaction network
"hipA" - HipA in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hipAHipA (437 aa)    
Predicted Functional Partners:
hipB
HipB transcriptional regulator (90 aa)
 
          0.979
IL2419
Cro/CI family transcriptional regulator (191 aa)
     
 
  0.776
IL1607
DNA-binding transcriptional regulator (275 aa)
     
 
  0.776
relE
Cytotoxic translational repressor of toxin-antitoxin stability system (95 aa)
         
  0.707
plsB
Glycerol-3-phosphate acyltransferase (840 aa)
           
  0.546
rmf
Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes) (58 aa)
   
          0.512
IL2084
HTH-type transcriptional regulator (106 aa)
 
          0.485
IL2083
Hypothetical protein (441 aa)
 
     
  0.452
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (17%) [HD]