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dps_1 protein (Idiomarina loihiensis) - STRING interaction network
"dps_1" - DNA-binding protein in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
dps_1DNA-binding protein (171 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (102 aa)
     
      0.940
ligA
NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (670 aa)
       
 
  0.825
dnaA
DNA replication initiation ATPase; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (454 aa)
     
      0.801
clpA
ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones (756 aa)
   
 
  0.791
oxyR
LysR family transcriptional regulator (304 aa)
         
  0.758
clpB
ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE (857 aa)
   
 
  0.607
xenA
Xenobiotic reductase A (362 aa)
              0.552
osmC
Organic hydroperoxide reductase (140 aa)
   
   
  0.523
IL0080
OsmC-like organic hydroperoxide reductase (139 aa)
   
   
  0.523
wrbA
Multimeric flavodoxin WrbA (185 aa)
     
   
  0.506
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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