STRINGSTRING
qseB_1 protein (Idiomarina loihiensis) - STRING interaction network
"qseB_1" - annotation not available in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qseB_1annotation not available (220 aa)    
Predicted Functional Partners:
qseC_1
annotation not available (407 aa)
 
  0.991
qseC_2
Signal transduction histidine kinase; Possible quorum sensing regulator (469 aa)
 
  0.927
IL0093
annotation not available (265 aa)
 
          0.895
IL0094
annotation not available (217 aa)
 
          0.893
IL0092
Heme oxygenase related enzyme; Probably involved in regulation of extracellular enzyme genes (tenA-like) (225 aa)
              0.880
IL0091
annotation not available (449 aa)
              0.873
barA
annotation not available (866 aa)
 
0.853
IL0090
Thermostable hemolysin related protein; Belongs to Acyl-CoA N-acyltransferase superfamily (200 aa)
              0.834
IL1649
annotation not available (520 aa)
   
   
  0.816
kdpD
annotation not available (343 aa)
 
  0.789
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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