STRINGSTRING
IL0100 protein (Idiomarina loihiensis) - STRING interaction network
"IL0100" - Signal protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0100Signal protein (301 aa)    
Predicted Functional Partners:
IL0101
Hypothetical protein (848 aa)
 
          0.884
IL0099
Hypothetical protein (132 aa)
              0.859
IL0102
3-phytase (598 aa)
 
          0.849
araC
AraC-type DNA-binding domain (192 aa)
 
          0.802
IL2267
Signal protein (737 aa)
   
          0.522
IL0206
Intracellular signaling protein (866 aa)
   
          0.492
IL0935
Signal protein (763 aa)
   
          0.458
IL0492
Signal transduction histidine kinase (539 aa)
   
          0.425
IL2120
Signal transduction histidine kinase (577 aa)
   
          0.423
IL0298
Signal protein (400 aa)
   
          0.423
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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