STRINGSTRING
IL0121 protein (Idiomarina loihiensis) - STRING interaction network
"IL0121" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0121Hypothetical protein (151 aa)    
Predicted Functional Partners:
IL0283
Hypothetical protein (71 aa)
   
          0.722
cry
Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity) (449 aa)
              0.648
damX
Hypothetical protein (519 aa)
   
          0.642
IL0065
Transcription negative regulator (215 aa)
   
          0.553
IL2053
Redox protein (132 aa)
 
          0.518
csgA
Cell-cell signaling protein CsgA (240 aa)
 
          0.484
copD
Copper export protein (281 aa)
   
          0.456
IL1231
Hypothetical protein (144 aa)
   
          0.445
IL1403
Hypothetical protein (344 aa)
   
          0.444
IL0123
UDP-glucose 4-epimerase (335 aa)
              0.437
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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