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cry protein (Idiomarina loihiensis) - STRING interaction network
"cry" - Deoxyribodipyrimidine photolyase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryDeoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity) (449 aa)    
Predicted Functional Partners:
IL1989
Deoxyribodipyrimidine photolyase (518 aa)
 
     
  0.707
IL1389
Hypothetical protein (311 aa)
 
   
  0.689
csgA
Cell-cell signaling protein CsgA (240 aa)
 
        0.656
IL0121
Hypothetical protein (151 aa)
              0.648
IL2050
Hypothetical protein (83 aa)
 
          0.594
IL0123
UDP-glucose 4-epimerase (335 aa)
              0.566
IL1550
Flavoprotein oxygenase domain-containing protein (218 aa)
 
          0.536
blc
Outer membrane lipoprotein (178 aa)
 
        0.531
IL1391
RNA polymerase sigma factor (206 aa)
 
          0.523
cysK
Cysteine synthase (350 aa)
     
      0.510
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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