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csgB protein (Idiomarina loihiensis) - STRING interaction network
"csgB" - Minor curlin subunit CsgB, nucleation component of curlin monomers in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csgBMinor curlin subunit CsgB, nucleation component of curlin monomers (135 aa)    
Predicted Functional Partners:
IL0159
Hypothetical protein (495 aa)
 
          0.947
csgF
Curli assembly protein CsgF (127 aa)
 
          0.908
csgG
CsgG (251 aa)
 
          0.900
csgE
Curli production assembly/transport component CsgE (125 aa)
              0.620
IL1814
Hypothetical protein (198 aa)
   
          0.583
IL0161
Secreted subtilisin-like peptidase (844 aa)
 
          0.458
IL2497
Hypothetical protein (225 aa)
   
          0.449
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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