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IL0165 protein (Idiomarina loihiensis) - STRING interaction network
"IL0165" - Outer membrane protein OmpW in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0165Outer membrane protein OmpW (232 aa)    
Predicted Functional Partners:
degQ
Serine protease (451 aa)
       
      0.702
degS
Serine protease (349 aa)
       
      0.702
hemN
Coproporphyrinogen III oxidase (453 aa)
 
   
  0.656
IL0164
Hypothetical protein (238 aa)
              0.636
fecA
Outer membrane receptor for Fe3+-dicitrate (709 aa)
   
          0.472
IL0163
2OG-Fe(II) oxygenase (336 aa)
              0.423
IL0176
Malonyl CoA-ACP transacylase (333 aa)
   
          0.401
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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