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IL0180 protein (Idiomarina loihiensis) - STRING interaction network
"IL0180" - Ferredoxin in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0180Ferredoxin (65 aa)    
Predicted Functional Partners:
IL0181
Collagenase protease (432 aa)
              0.910
gltB
Glutamate synthase subunit alpha (1488 aa)
   
 
  0.907
IL2359
FMN reductase (233 aa)
   
  0.842
fnr
Anaerobic regulatory protein (231 aa)
         
  0.752
IL2573
(Fe-S)-binding protein (476 aa)
   
 
  0.713
cyoA
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (373 aa)
     
 
  0.692
fabV
trans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP) (392 aa)
       
      0.642
IL1315
GlcD-like FAD/FMN dehydrogenase/GlpC-like Fe-S oxidoreductase domain-containing protein (1009 aa)
   
  0.626
IL0178
glutaryl-CoA dehydrogenase (390 aa)
         
  0.592
glnA
Glutamine synthetase (469 aa)
         
  0.591
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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