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IL0181 protein (Idiomarina loihiensis) - STRING interaction network
"IL0181" - Collagenase protease in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0181Collagenase protease (432 aa)    
Predicted Functional Partners:
IL0180
Ferredoxin (65 aa)
              0.910
IL0193
Collagenase (290 aa)
 
 
  0.684
fnr
Anaerobic regulatory protein (231 aa)
              0.628
IL0178
glutaryl-CoA dehydrogenase (390 aa)
              0.579
acoA
Oxoisovalerate dehydrogenase subunits alpha/beta (728 aa)
              0.555
IL0176
Malonyl CoA-ACP transacylase (333 aa)
              0.555
narL
Transcriptional regulator NarL (219 aa)
              0.549
IL0191
Lipid carrier protein (165 aa)
 
   
  0.544
pheT
Phenylalanyl-tRNA synthetase beta subunit (795 aa)
   
        0.489
glyQ
glycyl-tRNA synthetase subunit alpha (308 aa)
   
        0.458
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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