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IL0193 protein (Idiomarina loihiensis) - STRING interaction network
"IL0193" - Collagenase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0193Collagenase (290 aa)    
Predicted Functional Partners:
IL0192
Collagenase (330 aa)
 
 
  0.993
IL0191
Lipid carrier protein (165 aa)
 
   
  0.952
IL0194
Heme/copper membrane protein (400 aa)
 
          0.803
narX
Nitrate/nitrite sensor histidine kinase (598 aa)
 
          0.692
IL0181
Collagenase protease (432 aa)
 
 
  0.684
narK
Nitrate/nitrite transporter (443 aa)
   
        0.678
hemN
Coproporphyrinogen III oxidase (453 aa)
              0.556
pheT
Phenylalanyl-tRNA synthetase beta subunit (795 aa)
   
        0.489
ubiD
3-polyprenyl-4-hydroxybenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis (490 aa)
 
        0.462
glyQ
glycyl-tRNA synthetase subunit alpha (308 aa)
   
        0.458
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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