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IL0194 protein (Idiomarina loihiensis) - STRING interaction network
"IL0194" - Heme/copper membrane protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0194Heme/copper membrane protein (400 aa)    
Predicted Functional Partners:
IL0193
Collagenase (290 aa)
 
          0.803
IL0192
Collagenase (330 aa)
 
          0.781
IL0191
Lipid carrier protein (165 aa)
 
          0.631
IL2391
YjeB/RRF2 family transcriptional regulator (150 aa)
 
     
  0.603
hemN
Coproporphyrinogen III oxidase (453 aa)
 
          0.530
IL0028
Cytochrome c4 (208 aa)
   
          0.518
IL0186
Nitric oxide reductase large subunit (746 aa)
 
   
  0.440
IL1308
Hypothetical protein (251 aa)
   
          0.414
IL0205
Cytochrome c5 (141 aa)
   
          0.408
IL1638
Efflux family outer membrane protein (416 aa)
   
          0.400
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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