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IL0208 protein (Idiomarina loihiensis) - STRING interaction network
"IL0208" - Hypothetical protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0208Hypothetical protein (81 aa)    
Predicted Functional Partners:
fpr
Ferredoxin-NADP reductase (246 aa)
              0.845
ubiH
2-polyprenyl-6-methoxyphenol hydroxylase (388 aa)
 
     
  0.655
rep
Rep helicase, a single-stranded DNA dependent ATPase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3’ to 5’ direction (669 aa)
              0.652
IL2351
Rhodanese-like sulfurtransferase (307 aa)
       
      0.642
IL0210
Hypothetical protein (188 aa)
              0.639
IL0939
UbiH/Coq6 family FAD-binding oxidoreductase (380 aa)
 
          0.638
IL2372
Hypothetical protein (201 aa)
   
     
  0.637
IL2099
Hypothetical protein (188 aa)
   
        0.633
lppC
Lipoprotein (627 aa)
   
          0.586
visC
UbiH/Coq6 family FAD-binding oxidoreductase (392 aa)
 
          0.575
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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