STRINGSTRING
IL0230 protein (Idiomarina loihiensis) - STRING interaction network
"IL0230" - Fe-S-cluster domain-containing protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0230Fe-S-cluster domain-containing protein (85 aa)    
Predicted Functional Partners:
rpoH
RNA polymerase factor sigma-32 (286 aa)
   
        0.864
IL0225
N-6 adenine-specific DNA methylase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle (193 aa)
   
        0.568
ftsY
Signal recognition particle GTPase; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (449 aa)
   
        0.553
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division (329 aa)
              0.537
ftsE
FtsE (225 aa)
              0.537
trpC
Anthranilate isomerase (484 aa)
   
        0.467
IL2343
Methyl-accepting chemotaxis protein (546 aa)
       
      0.448
IL2064
Methyl-accepting chemotaxis protein (436 aa)
       
      0.448
IL1880
Methyl-accepting chemotaxis protein (563 aa)
       
      0.448
IL1421
Methyl-accepting chemotaxis protein (663 aa)
       
      0.448
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (10%) [HD]