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IL0275 protein (Idiomarina loihiensis) - STRING interaction network
"IL0275" - Na+ ABC transporter permease in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0275Na+ ABC transporter permease (401 aa)    
Predicted Functional Partners:
IL0274
ABC-type Na+ efflux pump, ATPase (314 aa)
 
   
  0.999
IL0481
ABC-type Na+ transport system, ATPase (244 aa)
       
  0.769
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA (533 aa)
              0.592
IL2536
Hypothetical protein (288 aa)
   
          0.583
IL0313
Signal protein (360 aa)
 
          0.538
IL1259
Glycosyltransferase (229 aa)
   
          0.500
damX
Hypothetical protein (519 aa)
   
          0.492
IL1285
Hypothetical protein (581 aa)
   
          0.484
aefA
Small-conductance mechanosensitive channel (295 aa)
 
          0.467
IL2059
ABC transporter ATPase/permease (432 aa)
   
          0.457
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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