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IL0278 protein (Idiomarina loihiensis) - STRING interaction network
"IL0278" - Fatty-acid desaturase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0278Fatty-acid desaturase (379 aa)    
Predicted Functional Partners:
IL0277
DNA-binding transcriptional repressor FabR (206 aa)
 
          0.687
IL0279
Hypothetical protein (105 aa)
              0.571
fumB
Fumarase B (507 aa)
     
        0.564
IL0276
Acylaminoacyl peptidase (672 aa)
   
        0.526
IL2398
Phosphodiesterase-nucleotide pyrophosphatase-like protein (402 aa)
   
        0.471
IL1385
NAD/FAD-binding protein (424 aa)
   
        0.453
IL0280
Hypothetical protein (259 aa)
              0.443
cfa
Cyclopropane fatty acyl phospholipid synthase (371 aa)
   
        0.404
IL1383
Cyclopropane-fatty-acyl-phospholipid synthase (412 aa)
   
        0.404
IL1384
Hypothetical protein (240 aa)
   
        0.404
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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