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IL0296 protein (Idiomarina loihiensis) - STRING interaction network
"IL0296" - Response regulator in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0296Response regulator (240 aa)    
Predicted Functional Partners:
IL0295
Regulator of cell autolysis (HATPase) (334 aa)
 
  0.984
IL1260
Signal transduction ATPase (364 aa)
 
  0.894
IL0297
Metal-dependent hydrolase (453 aa)
              0.830
IL0298
Signal protein (400 aa)
         
  0.606
IL0299
Hypothetical protein (218 aa)
              0.570
rpoE
RNA polymerase sigma factor RpoE (192 aa)
           
  0.551
IL0294
Hypothetical protein (146 aa)
              0.538
IL0293
Diacylglycerol kinase-like protein (299 aa)
              0.538
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (313 aa)
         
  0.438
argH
Argininosuccinate lyase (620 aa)
         
  0.433
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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