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IL0351 protein (Idiomarina loihiensis) - STRING interaction network
"IL0351" - Amino acid ABC transporter substrate-binding protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0351Amino acid ABC transporter substrate-binding protein (263 aa)    
Predicted Functional Partners:
IL1262
Hypothetical protein (281 aa)
   
          0.641
IL2429
ABC transporter substrate-binding protein (428 aa)
   
          0.625
IL0688
Periplasmic substrate-binding protein (280 aa)
   
          0.613
IL2428
Secreted protein related to cyanophycinase CphE (558 aa)
   
          0.606
IL1374
Hypothetical protein (449 aa)
   
          0.543
IL0923
Response regulator (490 aa)
   
          0.532
IL1283
Thioredoxin related protein (79 aa)
   
          0.519
tuf1
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (394 aa)
              0.514
IL1208
Response regulator (520 aa)
   
          0.504
IL0604
Signal transduction histidine kinase (455 aa)
   
          0.492
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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