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IL0358 protein (Idiomarina loihiensis) - STRING interaction network
"IL0358" - HlyD family multidrug efflux protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0358HlyD family multidrug efflux protein (353 aa)    
Predicted Functional Partners:
IL0359
Hypothetical protein (342 aa)
 
          0.969
IL0357
MarR family transcriptional regulator (162 aa)
 
        0.964
tolC
Outer membrane protein (461 aa)
   
  0.698
IL1634
Outer membrane efflux protein (415 aa)
   
  0.698
czcC
Co/Zn/Cd efflux system protein (415 aa)
   
  0.698
IL2635
Hypothetical protein (559 aa)
 
 
    0.678
ssb
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (186 aa)
 
          0.573
IL2305
HlyD family secretion protein (351 aa)
 
 
 
  0.547
mshC
Type II secretory pathway component (144 aa)
   
          0.451
IL0355
Major facilitator superfamily permease (458 aa)
   
        0.444
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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