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mshG protein (Idiomarina loihiensis) - STRING interaction network
"mshG" - Type II secretory pathway in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mshGType II secretory pathway; PulF-like (412 aa)    
Predicted Functional Partners:
mshL
Type II secretory pathway; PulD-like (557 aa)
 
 
  0.982
mshE
Type II secretory pathway, ATPase; MshE-like (571 aa)
 
 
  0.981
mshI_2
annotation not available (202 aa)
 
 
  0.944
mshI_1
annotation not available (303 aa)
 
 
  0.942
mshJ
annotation not available (211 aa)
 
 
  0.942
mshN
annotation not available (357 aa)
 
        0.910
IL2025
annotation not available (494 aa)
 
 
  0.880
IL0452
annotation not available (437 aa)
 
 
  0.880
mshM
annotation not available (302 aa)
 
          0.874
IL0372
annotation not available (149 aa)
              0.845
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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