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mshG protein (Idiomarina loihiensis) - STRING interaction network
"mshG" - Type II secretory pathway in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mshGType II secretory pathway (412 aa)    
Predicted Functional Partners:
mshE
Type II secretory pathway, ATPase (571 aa)
 
   
  0.988
mshL
Type II secretory pathway (557 aa)
 
   
  0.976
IL0363
Type II secretory pathway component (303 aa)
 
          0.949
mshN
Hypothetical protein (357 aa)
 
     
  0.949
mshJ
Type II secretory pathway component (211 aa)
 
     
  0.947
mshM
General secretion pathway ATPase (302 aa)
 
     
  0.933
pilT
Hypothetical protein (344 aa)
 
   
  0.923
IL2025
Type II secretory pathway, ATPase PulE-like (494 aa)
 
   
  0.921
IL0452
Type II secretory pathway, ATPase PulE (437 aa)
 
   
  0.921
pulO
Type II pili prepilin peptidase PilD/XcpA; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (286 aa)
 
   
  0.911
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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