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IL0389 protein (Idiomarina loihiensis) - STRING interaction network
"IL0389" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0389Hypothetical protein (171 aa)    
Predicted Functional Partners:
pmbA
Hypothetical protein (448 aa)
   
        0.798
IL0405
Organic solvent ABC transporter substrate-binding protein (155 aa)
 
          0.515
rdgC
Recombination associated protein (296 aa)
 
          0.472
tldD
Zn-dependent protease (473 aa)
   
        0.445
recO
Recombinational DNA repair protein RecO, RecF pathway; Involved in DNA repair and RecF pathway recombination (234 aa)
   
        0.429
sspA
Glutathione S-transferase-like protein (207 aa)
   
          0.427
IL0421
Hypothetical protein (191 aa)
   
          0.414
IL0393
Hypothetical protein; Displays ATPase and GTPase activities (283 aa)
   
        0.408
ptsO
Phosphotransferase system, HPr-related protein NPr (91 aa)
   
        0.404
holA
DNA polymerase III subunit delta (360 aa)
   
        0.403
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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