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lptC protein (Idiomarina loihiensis) - STRING interaction network
"lptC" - Hypothetical protein in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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lptCHypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA (187 aa)    
Predicted Functional Partners:
lptA
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (180 aa)
 
  0.996
yhbG
ABC transporter ATPase (241 aa)
   
  0.994
IL0400
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (184 aa)
   
   
  0.937
IL0401
Sugar phosphate isomerase (325 aa)
   
        0.928
rpoN
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (486 aa)
   
        0.849
lptD
Organic solvent tolerance protein OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (757 aa)
   
  0.811
IL1946
Permease (356 aa)
   
  0.807
IL0395
S30EA ribosomal protein (95 aa)
   
        0.799
IL0393
Hypothetical protein; Displays ATPase and GTPase activities (283 aa)
   
        0.799
ptsN
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) (156 aa)
              0.796
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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