STRINGSTRING
IL0423 protein (Idiomarina loihiensis) - STRING interaction network
"IL0423" - Endonuclease in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0423Endonuclease (116 aa)    
Predicted Functional Partners:
IL0421
Hypothetical protein (191 aa)
         
  0.910
IL0422
Phosphoheptose isomerase (180 aa)
   
   
  0.891
lppC
Lipoprotein (627 aa)
   
        0.888
comM
ATPase (515 aa)
 
        0.808
rsmI
Tetrapyrrole methylase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (284 aa)
   
   
  0.787
fabG
3-oxoacyl-ACP reductase (245 aa)
       
    0.644
IL0792
Acetoin(diacetyl) reductase (259 aa)
       
    0.644
IL0544
3-oxoacyl-ACP reductase (241 aa)
       
    0.644
comFC
Competence protein (229 aa)
 
        0.616
smf
DNA uptake Rossmann fold nucleotide-binding protein (336 aa)
 
        0.614
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (7%) [HD]