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lppC protein (Idiomarina loihiensis) - STRING interaction network
"lppC" - Lipoprotein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lppCLipoprotein (627 aa)    
Predicted Functional Partners:
mrcA
Peptidoglycan synthetase (820 aa)
   
 
  0.932
IL0421
Hypothetical protein (191 aa)
 
     
  0.928
IL0422
Phosphoheptose isomerase (180 aa)
 
     
  0.906
IL0423
Endonuclease (116 aa)
   
        0.888
rsmI
Tetrapyrrole methylase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (284 aa)
   
   
  0.860
IL1469
Hypothetical protein (371 aa)
   
     
  0.789
zipA
Secreted cell division protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins (325 aa)
   
          0.701
hemY
Hypothetical protein (387 aa)
   
        0.695
IL2372
Hypothetical protein (201 aa)
   
          0.606
IL1521
Hypothetical protein (365 aa)
   
     
  0.588
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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