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IL0443 protein (Idiomarina loihiensis) - STRING interaction network
"IL0443" - Hypothetical protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0443Hypothetical protein (152 aa)    
Predicted Functional Partners:
IL0444
Hypothetical protein (310 aa)
              0.657
IL0688
Periplasmic substrate-binding protein (280 aa)
   
          0.655
IL1619
Hypothetical protein (334 aa)
   
          0.593
mshP
Type II secretory pathway component (143 aa)
   
          0.578
IL1283
Thioredoxin related protein (79 aa)
   
          0.556
hipB
HipB transcriptional regulator (90 aa)
   
          0.522
mutT
7,8-dihydro-8-oxoguanine-triphosphatase (138 aa)
              0.485
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (905 aa)
              0.485
priB
Primosomal replication protein B; Binds single-stranded DNA at the primosome assembly site (PAS) (99 aa)
   
          0.430
IL1109
Hypothetical protein (150 aa)
   
          0.427
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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