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ampD protein (Idiomarina loihiensis) - STRING interaction network
"ampD" - N-acetyl-anhydromuramyl-L-alanine amidase in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ampDN-acetyl-anhydromuramyl-L-alanine amidase (182 aa)    
Predicted Functional Partners:
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides (330 aa)
   
   
  0.994
ampE
Regulatory protein AmpE (274 aa)
   
   
  0.928
mpl
UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate (433 aa)
 
     
  0.815
ampG
MFS family muropeptide transporter (447 aa)
 
     
  0.801
nadC
Nicotinate-nucleotide pyrophosphorylase (289 aa)
         
  0.777
lptD
Organic solvent tolerance protein OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (757 aa)
   
     
  0.677
pdhR
Transcriptional regulator PdhR (248 aa)
              0.616
IL1728
ABC transporter permease (264 aa)
 
          0.598
IL1818
Beta-lactamase class C family protein (473 aa)
       
  0.581
IL1555
Beta-lactamase class C family protein (460 aa)
       
  0.581
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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