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IL0465 protein (Idiomarina loihiensis) - STRING interaction network
"IL0465" - LysR family transcriptional regulator in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0465LysR family transcriptional regulator (292 aa)    
Predicted Functional Partners:
IL2095
LysR family transcriptional regulator (280 aa)
   
          0.760
IL1254
LysR family transcriptional regulator (281 aa)
   
          0.759
IL0627
LysR family transcriptional regulator (290 aa)
   
        0.755
IL0053
LysR family transcriptional regulator (298 aa)
   
          0.721
IL0466
RND efflux system membrane fusion protein (355 aa)
 
          0.699
IL1772
LysR family transcriptional regulator (303 aa)
   
          0.685
IL1291
LysR family transcriptional regulator (303 aa)
   
          0.682
IL0865
DNA-binding transcriptional activator GcvA (299 aa)
   
          0.667
IL0467
RND family efflux transporter (1017 aa)
              0.635
oxyR
LysR family transcriptional regulator (304 aa)
   
          0.629
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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