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acnB protein (Idiomarina loihiensis) - STRING interaction network
"acnB" - Aconitase B in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acnBAconitase B (862 aa)    
Predicted Functional Partners:
gltA
Citrate synthase (426 aa)
 
 
  0.996
acnA
Aconitase A; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (889 aa)
   
 
  0.991
prpB
2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate (292 aa)
         
  0.990
IL1425
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (864 aa)
   
 
0.984
IL1433
Monomeric isocitrate dehydrogenase (741 aa)
   
 
  0.982
prpD
2-methylcitrate dehydratase (494 aa)
       
  0.978
aceA
Isocitrate lyase (445 aa)
     
 
  0.975
IL0861
Isocitrate dehydrogenase (334 aa)
       
    0.973
IL1424
Hypothetical protein (392 aa)
       
  0.940
prpC
Citrate synthase (374 aa)
   
 
  0.921
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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